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Construction of a guide-RNA for site-directed RNA mutagenesis utilising intracellular A-to-I RNA editing.

Fukuda M, Umeno H, Nose K, Nishitarumizu A, Noguchi R, Nakagawa H.

Sci Rep. 2017 Feb 2;7:41478. doi: 10.1038/srep41478.



Identification of an RNA element for specific coordination of A-to-I RNA editing on HTR2C pre-mRNA.

Fukuda M, Oyama Y, Nishitarumizu A, Omura M, Nose K, Deshimaru M.

Genes Cells. 2015 Oct;20(10):834-46. doi: 10.1111/gtc.12272. Epub 2015 Aug 11.



One-pot synthesis of dibenzo[b,h][1,6]naphthyridines from 2-acetylaminobenzaldehyde: application to a fluorescent DNA-binding compound.

Okuma K, Koga T, Ozaki S, Suzuki Y, Horigami K, Nagahora N, Shioji K, Fukuda M, Deshimaru M.

Chem Commun (Camb). 2014 Dec 21;50(98):15525-8. doi: 10.1039/c4cc07807a. Epub 2014 Oct 30.


Improved design of hammerhead ribozyme for selective digestion of target RNA through recognition of site-specific adenosine-to-inosine RNA editing.

Fukuda M, Kurihara K, Yamaguchi S, Oyama Y, Deshimaru M.

RNA. 2014 Mar;20(3):392-405. doi: 10.1261/rna.041202.113. Epub 2014 Jan 21.


Ribozyme design for selective target RNA cleavage depending on RNA modifications.

Fukuda M. Kurihara K, Deshimaru M.

Fukuoka Univ. Sci. Rep. 44 (1): 39-44, 2014



Simultaneous detection of ATP and GTP by covalently linked fluorescent ribonucleopeptide sensors.

Nakano S, Fukuda M, Tamura T, Sakaguchi R, Nakata E, Morii T.

J Am Chem Soc. 2013 Mar 6;135(9):3465-73. doi: 10.1021/ja3097652. Epub 2013 Feb 22.



A strategy for developing a hammerhead ribozyme for selective RNA cleavage depending on substitutional RNA editing.

Fukuda M, Kurihara K, Tanaka Y, Deshimaru M.

RNA. 2012 Sep;18(9):1735-44. doi: 10.1261/rna.033399.112. Epub 2012 Jul 13.



Construction of dopamine sensors by using fluorescent ribonucleopeptide complexes.

Liew FF, Hasegawa T, Fukuda M, Nakata E, Morii T.

Bioorg Med Chem. 2011 Aug 1;19(15):4473-81. doi: 10.1016/j.bmc.2011.06.031. Epub 2011 Jun 16.



Structural analysis of ribonucleopeptide aptamer against ATP.

Mashima T, Matsugami A, Nakano S, Inoue M, Fukuda M, Morii T, Katahira M.

Nucleic Acids Symp Ser (Oxf). 2009;(53):267-8. doi: 10.1093/nass/nrp134.



Structural aspects for the function of ATP-binding ribonucleopeptide receptors.

Nakano S, Fukuda M, Mashima T, Katahira M, Morii T.

Nucleic Acids Symp Ser (Oxf). 2009;(53):259-60. doi: 10.1093/nass/nrp130.


Covalently linked fluorescent ribonucreopeptide sensors.

Fukuda M, Fong-Fong L, Morii T.

Nucleic Acids Symp Ser (Oxf). 2009;(53):257-8. doi: 10.1093/nass/nrp129.


Construction of the Functional Biomolecules with the Ribonucleopeptide Complexes.

Fukuda M, Fong-Fong L, Nakano S, Morii T.

Springer, T. Yao (Eds.) “Zero Carbon Energy Kyoto 2009” Part II, 53-57 (2009) 


Construction of Photo-driven Artificial Reductase as a New Technology of Photo Energy Conversion System.

Fukuda M, Nakano S, Tainaka K, Fong-Fong L, Morii T. 

World Renewable Energy Congress 2009 proceedings, 594-596 (2009) 


A Modular Strategy for Development of RNA-based Fluorescent Sensors.

Fukuda M, Hasegawa T, Hayashi H, Morii T.

Springer, R. A. Potyrailo and V. M. Mirsky (Eds.), “Combinatorial methodologies for development of chemical and biological sensors” Chapter 10, 249-269 (2009)


Development of A Fluorescent Ribonucleopeptide Sensor for Histamine.

Fukuda M, Hayashi H, Hasegawa T, Morii T.

Trans. Mat. Res. Soc. Jpn., 34, 515-527 (2009)




Development of ribonucleopeptide-based fluorescent sensors for biologically active amines based on the stepwise molding strategy.

Tainaka K, Hasegawa T, Fukuda M, Nakano S, Fujieda N, Morii T.

Nucleic Acids Symp Ser (Oxf). 2008;(52):201-2. doi: 10.1093/nass/nrn102.


Selective recognition of a tetra-amino-acid motif containing phosphorylated tyrosine residue by ribonucleopeptide.

Nakano S, Hasegawa T, Fukuda M, Fujieda N, Tainaka K, Morii T.

Nucleic Acids Symp Ser (Oxf). 2008;(52):199-200. doi: 10.1093/nass/nrn101.


Construction of a stable functional ribonucleopeptide complex by the covalent linking method.

Fukuda M, Nakano S, Tainaka K, Fujieda N, Morii T.

Nucleic Acids Symp Ser (Oxf). 2008;(52):195-6. doi: 10.1093/nass/nrn099.


Context-dependent fluorescence detection of a phosphorylated tyrosine residue by a ribonucleopeptide.

Hasegawa T, Hagihara M, Fukuda M, Nakano S, Fujieda N, Morii T.

J Am Chem Soc. 2008 Jul 9;130(27):8804-12. doi: 10.1021/ja801734f.



福田将虎、森井 孝

生物物理48, 239-242 (2008) 




Stepwise functionalization of ribonucleopeptides: optimization of the response of fluorescent ribonucleopeptide sensors for ATP.

Hasegawa T, Hagihara M, Fukuda M, Morii T.

Nucleosides Nucleotides Nucleic Acids. 2007;26(10-12):1277-81.


Controlling a substrate-binding geometry of ribonucleopeptide receptor.

Fukuda M, Nakano S, Morii T.

Nucleic Acids Symp Ser (Oxf). 2007;(51):421-2.